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JASPAR
2020
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Detailed information of matrix profile
MA0120.1
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Matrix > MA0120.1
Profile summary
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Name:
id1
Matrix ID:
MA0120.1
Class:
C2H2 zinc finger factors
Family:
Collection:
CORE
Taxon:
Plants
Species:
Zea mays
Data Type:
SELEX
Validation:
15020707
Uniprot ID:
O65215
Source:
Comment:
Sequence logo
Download SVG
Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
1
3
1
0
0
2
3
1
8
0
0
2
]
C [
1
3
2
9
13
11
8
1
5
6
17
0
]
G [
2
4
9
3
4
4
2
1
1
7
0
18
]
T [
20
14
12
12
7
7
11
21
10
11
7
4
]
Binding sites information
HTML file
FASTA file
External links
Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
Wordclouds
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA0120.1
MA0120
1
id1
Zea mays
C2H2 zinc finger factors
JASPAR
TRANSFAC
MEME
RAW PFM
×
There is no centrality information of the model.
×
TFFM first order profile doesn't exist for this profile.
×
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: