Detailed information of matrix profile MA0205.2

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Profile summary
Name: Trl
Matrix ID: MA0205.2
Class: C2H2 zinc finger factors
Family:
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: ChIP-seq
Validation: 22099633
Uniprot ID: Q08605  
Source: 30413482
Comment: Motif with more informative columns

Sequence logo

Frequency matrix

         
A [ 825 549 413 50 28 27 50 178 154 252 920 631 ]
C [ 2179 3800 495 6638 45 6783 44 6535 44 1902 1972 2687 ]
G [ 870 621 845 29 182 38 21 54 47 597 1348 1330 ]
T [ 2984 1888 5105 141 6603 10 6743 91 6613 4107 2618 2210 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0205.1 MA0205 1 Trl Drosophila melanogaster
C2H2 zinc finger factors
MA0205.2 MA0205 2 Trl Drosophila melanogaster
C2H2 zinc finger factors
     

log(P-value) = -1512.86

TFFM details

TFFM ID: TFFM0612.1

ChIP-seq Centrality
log(P-value): -2776.81

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0612.1

ChIP-seq Centrality
log(P-value): -2390.53

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: