Detailed information of matrix profile MA0323.1

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Profile summary
Name: IXR1
Matrix ID: MA0323.1
Class: High-mobility group (HMG) domain factors
Family:
Collection: CORE
Taxon: Fungi
Species: Saccharomyces cerevisiae
Data Type: ChIP-chip
Validation: 16522208
Uniprot ID: P33417  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 161 121 68 28 59 59 28 121 121 0 0 28 6 0 0 ]
C [ 0 0 0 228 187 0 0 0 0 0 301 0 0 0 0 ]
G [ 0 0 112 0 0 187 169 71 0 301 0 244 285 112 244 ]
T [ 0 37 28 6 0 0 37 0 37 0 0 0 0 99 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0323.1 MA0323 1 IXR1 Saccharomyces cerevisiae
High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: