Detailed information of matrix profile MA0557.1

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Profile summary
Name: FHY3
Matrix ID: MA0557.1
Class: SWIM-type zinc finger
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 21803941
Uniprot ID: Q9LIE5  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 46 75 9 226 2 3 0 4 18 16 63 82 ]
C [ 81 58 210 3 230 16 220 0 208 40 68 44 ]
G [ 40 25 9 2 1 213 0 228 6 17 40 50 ]
T [ 68 77 7 4 2 3 15 3 3 162 64 59 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0557.1 MA0557 1 FHY3 Arabidopsis thaliana
SWIM-type zinc finger
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0481.1

ChIP-seq Centrality
log(P-value): -472.436

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0481.1

ChIP-seq Centrality
log(P-value): -492.348

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: