Detailed information of matrix profile MA1162.1

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Profile summary
Name: TCX2
Matrix ID: MA1162.1
Class: Other
Family: CPP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: F4JIF5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 318 0 0 0 281 599 581 71 30 8 68 331 497 413 232 ]
C [ 10 0 0 163 0 0 7 14 1 26 107 41 1 28 61 ]
G [ 93 0 0 1 318 0 1 0 14 6 132 173 41 23 49 ]
T [ 178 599 599 435 0 0 10 514 554 559 292 54 60 135 257 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1162.1 MA1162 1 TCX2 Arabidopsis thaliana
CPP Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0399.1

ChIP-seq Centrality
log(P-value): -5748.96

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0399.1

ChIP-seq Centrality
log(P-value): -5458.89

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: