Detailed information of matrix profile MA1171.1

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Profile summary
Name: MYB52
Matrix ID: MA1171.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q6R0C4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 18 109 109 0 0 0 9 46 50 35 31 ]
C [ 10 0 0 109 14 0 0 15 17 29 12 ]
G [ 0 0 0 0 95 109 0 16 7 10 39 ]
T [ 81 0 0 0 0 0 100 32 35 35 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1171.1 MA1171 1 MYB52 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: