Detailed information of matrix profile MA1175.1

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Profile summary
Name: MYB81
Matrix ID: MA1175.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9SLH1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 268 410 240 230 0 134 0 0 0 471 65 ]
C [ 39 7 1 0 506 114 0 0 0 0 223 ]
G [ 180 59 95 102 0 234 600 0 0 99 163 ]
T [ 113 124 264 268 94 118 0 600 600 30 149 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1175.1 MA1175 1 MYB81 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0371.1

ChIP-seq Centrality
log(P-value): -2590.64

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0371.1

ChIP-seq Centrality
log(P-value): -2511.85

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: