Detailed information of matrix profile MA1180.1

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Profile summary
Name: MYB3R4
Matrix ID: MA1180.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q94FL9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 127 29 595 595 0 0 0 26 110 456 142 294 220 170 163 ]
C [ 202 301 0 0 595 0 0 180 225 41 116 52 31 88 80 ]
G [ 115 3 0 0 0 595 566 1 2 71 102 69 33 48 91 ]
T [ 151 262 0 0 0 0 29 388 258 27 235 180 311 289 261 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1180.1 MA1180 1 MYB3R4 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0363.1

ChIP-seq Centrality
log(P-value): -2964.68

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0363.1

ChIP-seq Centrality
log(P-value): -2960.51

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: