Detailed information of matrix profile MA1188.1

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Profile summary
Name: At3g11280
Matrix ID: MA1188.1
Class: Helix-Turn-Helix
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 285 249 147 345 296 0 573 0 485 565 41 193 278 115 ]
C [ 30 28 51 52 22 0 6 0 0 0 64 34 28 60 ]
G [ 155 15 195 63 144 582 3 0 93 17 360 326 16 46 ]
T [ 112 290 189 122 120 0 0 582 4 0 117 29 260 361 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1188.1 MA1188 1 At3g11280 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0259.1

ChIP-seq Centrality
log(P-value): -1779.73

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0259.1

ChIP-seq Centrality
log(P-value): -1593.53

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: