Detailed information of matrix profile MA1191.1

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Profile summary
Name: AT3G10113
Matrix ID: MA1191.1
Class: Helix-Turn-Helix
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: F4J2J6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 118 218 398 0 599 0 596 0 0 53 160 106 152 143 192 ]
C [ 91 79 15 0 0 0 3 3 0 5 51 147 93 93 95 ]
G [ 103 103 78 599 0 0 0 0 0 1 54 120 147 129 143 ]
T [ 287 199 108 0 0 599 0 596 599 540 334 226 207 234 169 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1191.1 MA1191 1 AT3G10113 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0258.1

ChIP-seq Centrality
log(P-value): -53915.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0258.1

ChIP-seq Centrality
log(P-value): -54135.2

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: