Detailed information of matrix profile MA1208.1

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Profile summary
Name: GT-2
Matrix ID: MA1208.1
Class: Tryptophan cluster factors
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10437822
Uniprot ID: Q39117  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 284 208 214 354 131 176 5 0 435 598 529 417 402 309 ]
C [ 105 165 95 25 295 4 0 0 0 0 21 0 29 62 ]
G [ 97 52 107 186 36 378 593 0 35 0 13 0 56 56 ]
T [ 112 173 182 33 136 40 0 598 128 0 35 181 111 171 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1208.1 MA1208 1 GT-2 Arabidopsis thaliana
Trihelix Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0347.1

ChIP-seq Centrality
log(P-value): -7466.26

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0347.1

ChIP-seq Centrality
log(P-value): -7296.74

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: