Detailed information of matrix profile MA1237.1

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Profile summary
Name: AT4G16750
Matrix ID: MA1237.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9SUK8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 134 41 1 84 0 0 3 7 56 186 184 131 170 151 129 ]
C [ 79 160 0 1 590 0 4 227 20 47 192 41 91 166 72 ]
G [ 210 14 599 110 0 600 593 0 494 301 63 326 226 97 277 ]
T [ 177 385 0 405 10 0 0 366 30 66 161 102 113 186 122 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1237.1 MA1237 1 AT4G16750 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0264.1

ChIP-seq Centrality
log(P-value): -19155.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0264.1

ChIP-seq Centrality
log(P-value): -18926.9

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: