Detailed information of matrix profile MA1245.1

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Profile summary
Name: AT2G33710
Matrix ID: MA1245.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: P93007  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 123 67 192 1 0 0 7 0 12 160 32 135 180 111 120 ]
C [ 156 17 11 551 0 11 551 3 112 350 13 47 178 35 76 ]
G [ 11 350 372 0 583 572 0 573 456 8 475 342 49 329 308 ]
T [ 293 149 8 31 0 0 25 7 3 65 63 59 176 108 79 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1245.1 MA1245 1 AT2G33710 Arabidopsis thaliana
AP2/ERF domain
MA1245.2 MA1245 2 AT2G33710 Arabidopsis thaliana
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0253.1

ChIP-seq Centrality
log(P-value): -3654.78

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0253.1

ChIP-seq Centrality
log(P-value): -3552.37

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: