Detailed information of matrix profile MA1249.1

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Profile summary
Name: RAP210
Matrix ID: MA1249.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9SW63  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 147 126 116 77 67 143 0 0 0 563 1 488 224 209 202 ]
C [ 195 204 103 205 213 2 569 599 0 10 598 2 156 119 88 ]
G [ 77 82 154 46 34 454 0 0 599 0 0 98 104 67 140 ]
T [ 180 187 226 271 285 0 30 0 0 26 0 11 115 204 169 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1249.1 MA1249 1 RAP210 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0379.1

ChIP-seq Centrality
log(P-value): -16854.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0379.1

ChIP-seq Centrality
log(P-value): -16803.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: