Detailed information of matrix profile MA1251.1

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Profile summary
Name: DEAR5
Matrix ID: MA1251.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9952441
Uniprot ID: Q8W3M3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 217 209 21 0 18 0 0 0 1 2 204 183 151 176 145 173 192 177 159 ]
C [ 72 6 14 0 0 593 0 0 42 3 86 147 82 100 137 93 106 125 94 ]
G [ 134 100 162 593 9 0 593 593 0 582 259 66 187 170 127 182 151 117 196 ]
T [ 170 278 396 0 566 0 0 0 550 6 44 197 173 147 184 145 144 174 144 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1251.1 MA1251 1 DEAR5 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0322.1

ChIP-seq Centrality
log(P-value): -5285.24

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0322.1

ChIP-seq Centrality
log(P-value): -5191.52

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: