Detailed information of matrix profile MA1253.1

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Profile summary
Name: AT3G16280
Matrix ID: MA1253.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q9LU18  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 138 157 71 47 463 0 0 2 556 25 435 197 181 198 ]
C [ 187 68 268 444 16 555 561 0 5 479 33 170 114 93 ]
G [ 72 165 81 20 55 0 0 559 0 32 55 78 64 107 ]
T [ 164 171 141 50 27 6 0 0 0 25 38 116 202 163 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1253.1 MA1253 1 AT3G16280 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: