Detailed information of matrix profile MA1259.1

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Profile summary
Name: AT1G01250
Matrix ID: MA1259.1
Class: AP2/ERF domain
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15319480
Uniprot ID: Q1ECI2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 188 35 8 525 0 0 0 505 0 489 212 197 198 143 114 ]
C [ 70 308 540 0 572 572 0 26 572 7 184 124 63 168 222 ]
G [ 149 67 7 46 0 0 572 1 0 64 73 47 116 90 75 ]
T [ 165 162 17 1 0 0 0 40 0 12 103 204 195 171 161 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1259.1 MA1259 1 AT1G01250 Arabidopsis thaliana
AP2/ERF domain
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0228.1

ChIP-seq Centrality
log(P-value): -1415.72

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0228.1

ChIP-seq Centrality
log(P-value): -1425.14

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: