Detailed information of matrix profile MA1275.1

  1. Home
  2. Matrix > MA1275.1

Profile summary
Name: AT1G47655
Matrix ID: MA1275.1
Class: C2H2 zinc finger factors
Family: Dof-type
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q9SX97  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 102 30 491 0 0 0 0 263 85 106 144 ]
C [ 155 227 23 600 56 0 0 3 88 204 154 ]
G [ 45 1 86 0 0 0 0 2 84 158 144 ]
T [ 298 342 0 0 544 600 600 332 343 132 158 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1275.1 MA1275 1 AT1G47655 Arabidopsis thaliana
Dof-type C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0236.1

ChIP-seq Centrality
log(P-value): -760.155

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0236.1

ChIP-seq Centrality
log(P-value): -708.258

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: