| Name: | TCP1 |
| Matrix ID: | MA1284.1 |
| Class: | Basic helix-loop-helix factors (bHLH) |
| Family: | TCP domain |
| Collection: | CORE |
| Taxon: | Plants |
| Species: | Arabidopsis thaliana |
| Data Type: | DAP-seq |
| Validation: | 21241251 |
| Uniprot ID: | Q9FYG7 |
| Source: | 27203113 |
| Comment: |
| A [ | 40 | 19 | 28 | 24 | 21 | 29 | 24 | 31 | 35 | 34 | 23 | 40 | 18 | 43 | 31 | 22 | 48 | 23 | 17 | 9 | 4 | 0 | 0 | 25 | 0 | 0 | 0 | 84 | 0 | 36 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8 | 21 | 18 | 15 | 10 | 36 | 40 | 36 | 11 | 17 | 25 | 12 | 11 | 8 | 10 | 15 | 12 | 22 | 2 | 8 | 0 | 0 | 1 | 8 | 95 | 95 | 95 | 5 | 84 | 16 | ] |
| G [ | 35 | 19 | 27 | 37 | 36 | 15 | 11 | 13 | 26 | 22 | 31 | 18 | 43 | 28 | 34 | 37 | 22 | 34 | 61 | 26 | 82 | 95 | 94 | 54 | 0 | 0 | 0 | 6 | 7 | 7 | ] |
| T [ | 12 | 36 | 22 | 19 | 28 | 15 | 20 | 15 | 23 | 22 | 16 | 25 | 23 | 16 | 20 | 21 | 13 | 16 | 15 | 52 | 9 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 4 | 36 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1284.1 | MA1284 | 1 | TCP1 |
Arabidopsis thaliana
|
TCP domain | Basic helix-loop-helix factors (bHLH) |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: