Detailed information of matrix profile MA1286.1

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Profile summary
Name: TCP24
Matrix ID: MA1286.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21241251
Uniprot ID: Q9C758  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 167 9 0 0 0 17 0 1 18 224 279 146 ]
C [ 40 9 27 0 0 26 594 593 553 196 94 214 ]
G [ 192 560 0 594 594 24 0 0 11 100 108 81 ]
T [ 195 16 567 0 0 527 0 0 12 74 113 153 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1286.1 MA1286 1 TCP24 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0396.1

ChIP-seq Centrality
log(P-value): -10268.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0396.1

ChIP-seq Centrality
log(P-value): -10268.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: