Detailed information of matrix profile MA1290.1

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Profile summary
Name: TCP17
Matrix ID: MA1290.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12000681
Uniprot ID: Q9LEZ9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 13 6 6 0 0 0 85 2 1 101 2 ]
C [ 9 6 5 1 0 0 20 106 105 0 92 ]
G [ 77 6 80 106 108 107 0 0 2 5 6 ]
T [ 9 90 17 1 0 1 3 0 0 2 8 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1290.1 MA1290 1 TCP17 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: