Detailed information of matrix profile MA1291.1

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Profile summary
Name: TCP7
Matrix ID: MA1291.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21241251
Uniprot ID: Q9FMX2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 159 32 3 0 52 106 0 0 0 573 0 ]
C [ 66 75 4 0 0 162 583 588 520 0 587 ]
G [ 321 30 556 586 514 92 1 0 0 15 0 ]
T [ 42 451 25 2 22 228 4 0 68 0 1 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1291.1 MA1291 1 TCP7 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0398.1

ChIP-seq Centrality
log(P-value): -3292.41

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0398.1

ChIP-seq Centrality
log(P-value): -3304.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: