Detailed information of matrix profile MA1292.1

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Profile summary
Name: MYB27
Matrix ID: MA1292.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22197883
Uniprot ID: Q9SCP1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 87 150 11 591 0 0 1 596 595 6 99 121 121 107 129 ]
C [ 139 103 25 0 596 596 0 0 1 178 2 6 71 77 109 ]
G [ 55 66 48 5 0 0 0 0 0 0 0 0 19 55 80 ]
T [ 315 277 512 0 0 0 595 0 0 412 495 469 385 357 278 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1292.1 MA1292 1 MYB27 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0360.1

ChIP-seq Centrality
log(P-value): -10388.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0360.1

ChIP-seq Centrality
log(P-value): -10001.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: