Detailed information of matrix profile MA1294.1

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Profile summary
Name: MYB62
Matrix ID: MA1294.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22197883
Uniprot ID: Q9C9G7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 110 94 242 0 0 29 440 435 33 71 130 100 112 108 86 ]
C [ 134 71 5 440 440 0 0 5 263 58 60 61 76 74 96 ]
G [ 66 47 188 0 0 0 0 0 32 12 23 66 48 88 60 ]
T [ 130 228 5 0 0 411 0 0 112 299 227 213 204 170 198 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1294.1 MA1294 1 MYB62 Arabidopsis thaliana
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: