Detailed information of matrix profile MA1323.1

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Profile summary
Name: GATA19
Matrix ID: MA1323.1
Class: Other C4 zinc finger-type factors
Family: GATA-type zinc fingers
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12504119
Uniprot ID: Q6QPM2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 102 162 9 0 57 0 202 0 0 41 52 ]
C [ 13 6 27 180 89 3 0 0 190 51 27 ]
G [ 81 1 7 1 55 197 0 0 2 54 101 ]
T [ 6 33 159 21 1 2 0 202 10 56 22 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1323.1 MA1323 1 GATA19 Arabidopsis thaliana
GATA-type zinc fingers Other C4 zinc finger-type factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0344.1

ChIP-seq Centrality
log(P-value): -168.37

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0344.1

ChIP-seq Centrality
log(P-value): -178.533

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: