Detailed information of matrix profile MA1324.1

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Profile summary
Name: GATA20
Matrix ID: MA1324.1
Class: Other C4 zinc finger-type factors
Family: GATA-type zinc fingers
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12504119
Uniprot ID: Q9ZPX0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 1 76 0 0 0 4 68 5 ]
C [ 0 0 0 76 38 0 0 1 ]
G [ 73 0 0 0 25 70 8 0 ]
T [ 2 0 76 0 13 2 0 70 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1324.1 MA1324 1 GATA20 Arabidopsis thaliana
GATA-type zinc fingers Other C4 zinc finger-type factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0489.1

ChIP-seq Centrality
log(P-value): -9919.95

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0489.1

ChIP-seq Centrality
log(P-value): -10918.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: