Detailed information of matrix profile MA1325.1

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Profile summary
Name: GATA14
Matrix ID: MA1325.1
Class: Other C4 zinc finger-type factors
Family: GATA-type zinc fingers
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12504119
Uniprot ID: Q9M1U2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 208 244 285 320 165 7 421 0 549 0 0 24 341 199 280 ]
C [ 119 97 83 70 127 296 31 0 0 0 550 26 42 133 89 ]
G [ 125 124 112 55 70 46 97 547 2 0 1 4 87 119 101 ]
T [ 99 86 71 106 189 202 2 4 0 551 0 497 81 100 81 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1325.1 MA1325 1 GATA14 Arabidopsis thaliana
GATA-type zinc fingers Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Included Models:

GC Content: