Detailed information of matrix profile MA1328.1

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Profile summary
Name: ATHB34
Matrix ID: MA1328.1
Class: Homeo domain factors
Family: ZF-HD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID: Q8LFD3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 16 372 587 0 0 595 341 56 151 270 201 110 318 386 337 ]
C [ 32 6 0 1 0 0 19 127 93 55 102 66 4 17 11 ]
G [ 13 222 9 0 0 1 225 175 182 137 76 92 52 45 11 ]
T [ 539 0 4 599 600 4 15 242 174 138 221 332 226 152 241 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1328.1 MA1328 1 ATHB34 Arabidopsis thaliana
ZF-HD Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0292.1

ChIP-seq Centrality
log(P-value): -3542.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0292.1

ChIP-seq Centrality
log(P-value): -3541.59

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: