Detailed information of matrix profile MA1335.1

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Profile summary
Name: TGA4
Matrix ID: MA1335.1
Class: Basic leucine zipper factors (bZIP)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8487298
Uniprot ID: Q39162  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 85 45 316 0 0 598 0 19 26 63 433 ]
C [ 111 37 195 0 0 0 527 0 5 398 0 ]
G [ 62 500 89 1 558 2 2 581 3 117 123 ]
T [ 342 18 0 599 42 0 71 0 566 22 44 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1335.1 MA1335 1 TGA4 Arabidopsis thaliana
Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0404.1

ChIP-seq Centrality
log(P-value): -5895.62

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0404.1

ChIP-seq Centrality
log(P-value): -6029.49

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: