Detailed information of matrix profile MA1342.1

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Profile summary
Name: bZIP50
Matrix ID: MA1342.1
Class: Basic leucine zipper factors (bZIP)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8487298
Uniprot ID: Q93ZE2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 213 239 232 199 184 279 2 0 597 0 25 0 79 591 0 69 277 ]
C [ 90 62 110 90 56 64 5 8 0 580 0 0 518 0 70 408 84 ]
G [ 190 165 116 119 228 239 0 585 0 1 572 0 0 1 231 60 124 ]
T [ 104 131 139 189 129 15 590 4 0 16 0 597 0 5 296 60 112 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1342.1 MA1342 1 bZIP50 Arabidopsis thaliana
Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0308.1

ChIP-seq Centrality
log(P-value): -10879.2

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0308.1

ChIP-seq Centrality
log(P-value): -10867.9

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: