Detailed information of matrix profile MA1361.1

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Profile summary
Name: bHLH18
Matrix ID: MA1361.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21335373
Uniprot ID: Q1PF17  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 68 59 4 191 0 2 4 0 64 88 97 60 133 6 51 32 19 ]
C [ 34 79 197 0 192 0 4 0 15 31 29 116 8 153 7 58 20 ]
G [ 60 34 0 3 0 199 0 190 61 27 15 13 32 4 143 2 128 ]
T [ 39 29 0 7 9 0 193 11 61 55 60 12 28 38 0 109 34 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1361.1 MA1361 1 bHLH18 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: