Detailed information of matrix profile MA1373.1

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Profile summary
Name: IDD2
Matrix ID: MA1373.1
Class: C2H2 zinc finger factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24039602
Uniprot ID: Q9SCQ6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 12 0 0 0 0 0 0 0 0 3 7 34 19 1 27 ]
C [ 0 3 0 1 0 0 92 3 1 17 0 2 33 25 2 ]
G [ 7 0 11 0 89 0 0 67 2 6 0 1 34 4 37 ]
T [ 75 91 83 93 5 94 2 24 91 68 87 57 8 64 28 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1373.1 MA1373 1 IDD2 Arabidopsis thaliana
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: