Detailed information of matrix profile MA1379.1

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Profile summary
Name: SOL1
Matrix ID: MA1379.1
Class: Other
Family: CPP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9M9H7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 316 0 0 0 431 600 600 93 65 14 35 266 389 483 364 ]
C [ 0 1 0 118 0 0 0 23 66 43 70 46 7 6 27 ]
G [ 16 0 45 0 169 0 0 0 3 0 54 69 37 16 17 ]
T [ 268 599 555 482 0 0 0 484 466 543 441 219 167 95 192 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1379.1 MA1379 1 SOL1 Arabidopsis thaliana
CPP Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0386.1

ChIP-seq Centrality
log(P-value): -4228.87

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0386.1

ChIP-seq Centrality
log(P-value): -4167.08

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: