Detailed information of matrix profile MA1380.1

  1. Home
  2. Matrix > MA1380.1

Profile summary
Name: AT2G20110
Matrix ID: MA1380.1
Class: Other
Family: CPP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9SL70  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 157 144 237 364 463 559 336 490 0 0 0 515 512 597 328 ]
C [ 12 20 112 49 65 0 13 0 0 0 194 0 85 0 33 ]
G [ 19 8 16 45 18 30 96 16 0 0 0 82 0 0 0 ]
T [ 409 425 232 139 51 8 152 91 597 597 403 0 0 0 236 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1380.1 MA1380 1 AT2G20110 Arabidopsis thaliana
CPP Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0251.1

ChIP-seq Centrality
log(P-value): -2241.81

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0251.1

ChIP-seq Centrality
log(P-value): -2239.42

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: