Detailed information of matrix profile MA1392.1

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Profile summary
Name: MYB98
Matrix ID: MA1392.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9S7L2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 123 239 200 251 33 0 0 0 580 0 250 233 220 181 161 ]
C [ 167 16 0 307 492 0 0 0 0 549 57 57 67 56 130 ]
G [ 59 138 80 36 67 594 0 0 0 0 126 65 48 38 73 ]
T [ 245 201 314 0 2 0 594 594 14 45 161 239 259 319 230 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1392.1 MA1392 1 MYB98 Arabidopsis thaliana
Myb Helix-Turn-Helix
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0372.1

ChIP-seq Centrality
log(P-value): -11090.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0372.1

ChIP-seq Centrality
log(P-value): -11033.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: