Detailed information of matrix profile MA1393.1

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Profile summary
Name: MYB70
Matrix ID: MA1393.1
Class: Helix-Turn-Helix
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 168 83 64 115 265 244 147 293 0 148 0 0 0 395 ]
C [ 90 33 35 26 27 32 5 12 510 156 0 0 0 15 ]
G [ 223 348 79 27 89 28 136 56 0 259 600 23 0 120 ]
T [ 119 136 422 432 219 296 312 239 90 37 0 577 600 70 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1393.1 MA1393 1 MYB70 Arabidopsis thaliana
Myb Helix-Turn-Helix
MA1393.2 MA1393 2 MYB70 Arabidopsis thaliana
Myb/SANT domain factors Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0368.1

ChIP-seq Centrality
log(P-value): -6003.76

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0368.1

ChIP-seq Centrality
log(P-value): -5822.87

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: