Detailed information of matrix profile MA1398.2

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Profile summary
Name: KUA1
Matrix ID: MA1398.2
Class: Helix-Turn-Helix
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9LVS0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 633 437 253 14 1780 26 1629 1611 69 678 477 ]
C [ 174 335 27 17 9 11 41 18 112 211 273 ]
G [ 377 102 1502 1771 14 29 40 61 1567 600 194 ]
T [ 633 943 35 15 14 1751 107 127 69 328 873 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1398.1 MA1398 1 KUA1 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
MA1398.2 MA1398 2 KUA1 Arabidopsis thaliana
Myb-related Helix-Turn-Helix
     

log(P-value) = -1346.66

TFFM details

TFFM ID: TFFM0278.2

ChIP-seq Centrality
log(P-value): -1500.82

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0278.2

ChIP-seq Centrality
log(P-value): -1604.77

TFFM detailed summary logos

Description:

Alias:

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Consensus:

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GC Content: