Detailed information of matrix profile MA1425.1

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Profile summary
Name: HYH
Matrix ID: MA1425.1
Class: Basic leucine zipper factors (bZIP)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 12023303
Uniprot ID: Q8W191  
Source: 31133749
Comment: only the center is preserved; We found that full-length HYH binding to the G-box is comparable to that of HY5 (data not shown).

Sequence logo

Frequency matrix

         
A [ 226 177 306 48 999 0 0 0 102 571 152 201 ]
C [ 226 177 392 747 0 999 0 0 523 72 321 396 ]
G [ 226 466 97 154 0 0 999 0 350 72 152 201 ]
T [ 321 177 203 48 0 0 0 999 23 283 372 201 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1425.1 MA1425 1 HYH Arabidopsis thaliana
Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: