Detailed information of matrix profile MA1430.1

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Profile summary
Name: TB1
Matrix ID: MA1430.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Oryza sativa
Data Type: PBM
Validation: 12000681
Uniprot ID: Q8LN68  
Source: 31133749
Comment:

Sequence logo

Frequency matrix

         
A [ 89 195 3 7 0 0 0 88 0 0 ]
C [ 119 13 4 0 0 0 0 518 999 999 ]
G [ 405 648 839 953 958 999 998 308 0 0 ]
T [ 385 143 153 37 41 0 0 84 0 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1430.1 MA1430 1 TB1 Oryza sativa
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: