Detailed information of matrix profile MA1509.1

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Profile summary
Name: IRF6
Matrix ID: MA1509.1
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18604160
Uniprot ID: O14896  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 2284 0 2 338 26 9 19 561 89 ]
C [ 7 12 17 9 0 2652 22 62 648 ]
G [ 368 2652 0 0 0 5 2652 2652 164 ]
T [ 98 0 2652 2314 2652 48 0 67 2652 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1509.1 MA1509 1 IRF6 Homo sapiens
Interferon-regulatory factors Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: