Detailed information of matrix profile MA1518.1

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Profile summary
Name: LHX1
Matrix ID: MA1518.1
Class: Homeo domain factors
Family: HD-LIM factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: P48742  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 2986 2105 14954 14954 569 2084 5724 2918 ]
C [ 3908 617 3100 0 39 4035 572 5234 ]
G [ 5037 495 5413 0 270 4878 9230 4118 ]
T [ 3023 14954 1101 0 14954 14954 949 2684 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1518.1 MA1518 1 LHX1 Homo sapiens
HD-LIM factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: