Detailed information of matrix profile MA1524.1

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Profile summary
Name: MSGN1
Matrix ID: MA1524.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 21750544
Uniprot ID: A6NI15  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 1228 3104 3269 0 6373 2607 3950 0 0 726 408 1488 ]
C [ 1781 1503 3104 6373 17 814 112 374 17 1613 3277 1615 ]
G [ 1976 3269 1132 10 287 190 627 0 6373 6373 576 2080 ]
T [ 1388 514 412 0 10 3766 2424 6373 0 663 3096 1190 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1524.1 MA1524 1 MSGN1 Homo sapiens
Tal-related factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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