Detailed information of matrix profile MA1538.1

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Profile summary
Name: NR2F1(var.3)
Matrix ID: MA1538.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 14559106
Uniprot ID: P10589  
Source: 28473536
Comment: additional binding mode

Sequence logo

Frequency matrix

         
A [ 1825 2566 50 45 0 12 3515 990 4 171 3515 67 356 79 312 ]
C [ 205 32 75 1 0 3515 52 858 1041 58 232 3515 3515 1049 1271 ]
G [ 1177 949 3515 3515 95 15 89 855 58 3515 87 45 121 75 280 ]
T [ 308 57 131 0 3515 81 0 813 2473 20 22 75 44 2466 1651 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1538.1 MA1538 1 NR2F1(var.3) Homo sapiens
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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