Detailed information of matrix profile MA1544.1

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Profile summary
Name: OVOL1
Matrix ID: MA1544.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 26504231
Uniprot ID: O14753  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 3275 8415 4541 15006 0 15006 15006 4 0 0 2100 6974 4724 3269 ]
C [ 4872 522 3415 2465 0 0 4 15006 0 0 0 3334 5450 3015 ]
G [ 3936 6591 3695 5767 9 0 0 0 15006 15006 389 793 505 2530 ]
T [ 2923 1613 3355 951 15006 0 0 1 0 0 15006 8031 9556 6192 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1544.1 MA1544 1 OVOL1 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: