Detailed information of matrix profile MA1545.1

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Profile summary
Name: OVOL2
Matrix ID: MA1545.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24735879
Uniprot ID: Q9BRP0  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 4025 5375 8885 3 0 0 0 0 12491 1859 3243 2782 2673 ]
C [ 1033 1849 1602 12491 12491 0 1402 0 13 5644 2607 5865 3144 ]
G [ 4556 4568 450 24 41 12491 0 9 151 3448 3395 1793 3872 ]
T [ 2877 7116 3607 0 0 0 12491 12491 0 6848 3246 6626 2802 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1545.1 MA1545 1 OVOL2 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0548.1

ChIP-seq Centrality
log(P-value): -365.489

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0548.1

ChIP-seq Centrality
log(P-value): -379.39

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: