Detailed information of matrix profile MA1555.1

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Profile summary
Name: RXRB(var.2)
Matrix ID: MA1555.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 14559106
Uniprot ID: P28702  
Source: 28473536
Comment: additional binding mode

Sequence logo

Frequency matrix

         
A [ 617 937 58 23 14 8 1803 7 123 1803 270 103 15 148 ]
C [ 194 14 32 11 41 1803 0 596 41 157 1803 1803 870 851 ]
G [ 868 866 1803 1803 53 35 59 15 1803 85 39 29 59 190 ]
T [ 124 18 58 309 1803 92 11 1207 23 35 27 59 934 614 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1555.1 MA1555 1 RXRB(var.2) Homo sapiens
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: