Detailed information of matrix profile MA1561.1

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Profile summary
Name: SOX12
Matrix ID: MA1561.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18403418
Uniprot ID: O15370  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 141 854 20 0 3 0 1 48 56 78 138 ]
C [ 305 57 44 0 0 4 2 854 34 58 109 ]
G [ 210 211 91 0 854 2 26 26 854 854 267 ]
T [ 198 129 854 854 0 854 854 47 48 153 854 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1561.1 MA1561 1 SOX12 Homo sapiens
SOX-related factors High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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