Detailed information of matrix profile MA1564.1

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Profile summary
Name: SP9
Matrix ID: MA1564.1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 26187067
Uniprot ID: P0CG40  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 660 588 353 412 30 14 173 9 96 284 518 226 ]
C [ 204 191 38 24 0 0 2451 17 56 113 309 952 ]
G [ 1167 1863 1259 2451 2451 2451 200 2451 1127 2451 2451 440 ]
T [ 420 188 1192 39 0 22 211 2 2451 321 566 834 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1564.1 MA1564 1 SP9 Homo sapiens
Three-zinc finger Kruppel-related factors C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: