Detailed information of matrix profile MA1566.1

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Profile summary
Name: TBX3
Matrix ID: MA1566.1
Class: T-Box factors
Family: TBX2-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18829543
Uniprot ID: O15119  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 578 484 1112 2544 0 2544 0 302 760 497 ]
C [ 620 947 2544 155 2544 0 2544 2544 1207 1003 ]
G [ 586 410 1471 634 0 735 45 862 481 399 ]
T [ 760 2544 170 115 0 16 6 427 2544 644 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1566.1 MA1566 1 TBX3 Homo sapiens
TBX2-related factors T-Box factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0598.1

ChIP-seq Centrality
log(P-value): -233.846

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0598.1

ChIP-seq Centrality
log(P-value): -219.612

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: