Detailed information of matrix profile MA1585.1

  1. Home
  2. Matrix > MA1585.1

Profile summary
Name: ZKSCAN1
Matrix ID: MA1585.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 28092692
Uniprot ID: P17029  
Source: 30462313
Comment: Matches motif derived from SmiLE-seq

Sequence logo

Frequency matrix

         
A [ 494 3469 27 34 0 6127 12 0 3308 454 ]
C [ 2880 750 6075 5980 0 0 6092 20 364 584 ]
G [ 1480 1303 12 101 48 0 5 53 2268 456 ]
T [ 1273 605 13 12 6079 0 18 6054 187 4633 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1585.1 MA1585 1 ZKSCAN1 Homo sapiens
More than 3 adjacent zinc finger factors C2H2 zinc finger factors
     

log(P-value) = -1461.86

TFFM details

TFFM ID: TFFM0630.1

ChIP-seq Centrality
log(P-value): -1433.46

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0630.1

ChIP-seq Centrality
log(P-value): -3642.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: